many many many Varia's websites, work in progress: https://many.vvvvvvaria.org
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'''
Created on Jan 25, 2016
@author: Aaron Kitzmiller <aaron_kitzmiller@harvard.edu?
'''
import unittest, os, sys
import shutil
import logging
import glob
from pelican import Pelican
from pelican.settings import read_settings
logging.basicConfig(stream=sys.stderr, level=logging.DEBUG)
class Test(unittest.TestCase):
def setUp(self):
try:
import rpy2
import rmd_reader
except Exception:
raise unittest.SkipTest("rpy not installed. Will not test rmd_reader.")
self.testtitle = 'rtest'
self.cwd = os.path.dirname(os.path.abspath(__file__))
logging.debug(self.cwd)
# Setup content dir and test rmd file
self.contentdir = os.path.join(self.cwd,'test-content')
logging.debug(self.contentdir)
try:
os.mkdir(self.contentdir)
except Exception:
pass
self.contentfile = os.path.join(self.contentdir,'test.rmd')
logging.debug(self.contentfile)
self.testrmd = '''Title: %s
Date: 2014-06-23
Let's make a simple plot about cars.
```{r}
cars <- c(1, 3, 6, 4, 9)
plot(cars)
```
''' % self.testtitle
with open(self.contentfile,'w') as f:
f.write(self.testrmd)
# Setup output dir
self.outputdir = os.path.join(self.cwd,'test-output')
logging.debug(self.outputdir)
try:
os.mkdir(self.outputdir)
except Exception:
pass
self.figpath = 'images'
def tearDown(self):
logging.debug('CLEAN')
if os.path.isdir(self.outputdir):
shutil.rmtree(self.outputdir)
if os.path.isdir(self.contentdir):
shutil.rmtree(self.contentdir)
def testKnitrSettings(self):
settings = read_settings(path=None, override={
'LOAD_CONTENT_CACHE': False,
'PATH': self.contentdir,
'OUTPUT_PATH': self.outputdir,
'RMD_READER_KNITR_OPTS_CHUNK': {'fig.path' : '%s/' % self.figpath},
'RMD_READER_KNITR_OPTS_KNIT': {'progress' : True, 'verbose': True},
'RMD_READER_RENAME_PLOT': 'disable',
'PLUGIN_PATHS': ['../'],
'PLUGINS': ['rmd_reader'],
})
pelican = Pelican(settings=settings)
pelican.run()
outputfilename = os.path.join(self.outputdir,'%s.html' % self.testtitle)
self.assertTrue(os.path.exists(outputfilename),'File %s was not created.' % outputfilename)
imagesdir = os.path.join(self.outputdir, self.figpath)
self.assertTrue(os.path.exists(imagesdir), 'figpath not created.')
imagefile = os.path.join(imagesdir, 'unnamed-chunk') + '-1-1.png'
logging.debug(imagefile)
images = glob.glob('%s/*' % imagesdir)
logging.debug(images)
self.assertTrue(os.path.exists(imagefile), 'image correctly named.')
self.assertTrue(len(images) == 1,'Contents of images dir is not correct: %s' % ','.join(images))
def testKnitrSettings2(self):
settings = read_settings(path=None, override={
'LOAD_CONTENT_CACHE': False,
'PATH': self.contentdir,
'OUTPUT_PATH': self.outputdir,
'RMD_READER_KNITR_OPTS_CHUNK': {'fig.path' : '%s/' % self.figpath},
'RMD_READER_KNITR_OPTS_KNIT': {'progress' : True, 'verbose': True},
'RMD_READER_RENAME_PLOT': 'chunklabel',
'PLUGIN_PATHS': ['../'],
'PLUGINS': ['rmd_reader'],
})
pelican = Pelican(settings=settings)
pelican.run()
outputfilename = os.path.join(self.outputdir,'%s.html' % self.testtitle)
self.assertTrue(os.path.exists(outputfilename),'File %s was not created.' % outputfilename)
imagesdir = os.path.join(self.outputdir, self.figpath)
self.assertTrue(os.path.exists(imagesdir), 'figpath not created.')
imagefile = os.path.join(imagesdir, os.path.splitext(os.path.split(self.contentfile)[1])[0]) + '-1-1.png'
logging.debug(imagefile)
self.assertTrue(os.path.exists(imagefile), 'image correctly named.')
images = glob.glob('%s/*' % imagesdir)
logging.debug(images)
self.assertTrue(len(images) == 1,'Contents of images dir is not correct: %s' % ','.join(images))
def testKnitrSettings3(self):
settings = read_settings(path=None, override={
'LOAD_CONTENT_CACHE': False,
'PATH': self.contentdir,
'OUTPUT_PATH': self.outputdir,
'RMD_READER_KNITR_OPTS_CHUNK': {'fig.path' : '%s/' % self.figpath},
'RMD_READER_KNITR_OPTS_KNIT': {'progress' : True, 'verbose': True},
'RMD_READER_RENAME_PLOT': 'directory',
'PLUGIN_PATHS': ['../'],
'PLUGINS': ['rmd_reader'],
})
pelican = Pelican(settings=settings)
pelican.run()
outputfilename = os.path.join(self.outputdir,'%s.html' % self.testtitle)
self.assertTrue(os.path.exists(outputfilename),'File %s was not created.' % outputfilename)
imagesdir = os.path.join(self.outputdir, self.figpath)
self.assertTrue(os.path.exists(imagesdir), 'figpath not created.')
imagefile = os.path.join(imagesdir, os.path.splitext(os.path.split(self.contentfile)[1])[0]) + '-unnamed-chunk-1-1.png'
logging.debug(imagefile)
self.assertTrue(os.path.exists(imagefile), 'image correctly named.')
images = glob.glob('%s/*' % imagesdir)
logging.debug(images)
self.assertTrue(len(images) == 1,'Contents of images dir is not correct: %s' % ','.join(images))
if __name__ == "__main__":
#import sys;sys.argv = ['', 'Test.testName']
unittest.main()